颅内动脉瘤环状RNA差异表达鉴定:生物信息学分析
DOI:
作者:
作者单位:

1.福建省福州市 福建中医药大学中西医结合学院;2.福建省福州市 福建医科大学研究生院;3.福建省福州市 福州市第二总医院神经外科;4.福州市第二总医院神经外科;5.安徽医科大学临床医学院

作者简介:

通信作者:

基金项目:

福建省卫生计生科研人才培养项目(2018-CXB-17),福建省自然科学基金资助项目(2022J011323)


Identification of differential expression of circular RNA in intracranial aneurysms:Bioinformatics analysis
Author:
Affiliation:

1.College of Integrated Chinese and Western Medicine, Fujian University of Traditional Chinese Medicine;2.The Graduate School of Fujian Medical University;3.Department of Neurosurgery, Fuzhou Second General Hospital;4.Clinical School of Anhui Medical University

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 音频文件
  • |
  • 视频文件
    摘要:

    目的:颅内动脉瘤(Intracranial aneurysm,IA)的发生与遗传因素密切相关;而研究表明环状RNA(circRNA)参与了血管重构及炎症反应调控,其在IA的发病中的作用尚不明确。为此本研究拟筛选颅内动脉瘤差异表达的circRNA,并分析其生物学意义。方法:纳入16例临床样本(IA组织10例,颞浅动脉对照6例),利用illumina高通量测序技术筛选差异表达的circRNA基因(Differentially Expressed CircRNAs,DECs);结合火山图及热图可视化表达差异,应用GO和KEGG联合富集分析挖掘DECs的功能关联;进一步采用qPCR验证候选circRNA的表达水平。结果:共鉴定28 850个DECs(上调10 081个,下调18 769个);KEGG分析表明,IA相关DECs显著富集于昼夜节律(circadian rhythm)、AMPK及Hedgehog信号通路(P<0.001);qPCR验证显示,hsa_circ_0003967、hsa_circ_0063305在IA组织中表达显著上调(p<0.01);而hsa_circ_0003091、和hsa_circ_0001742则显著下调(p<0.01),提示这些相关的信号通路如细胞粘附、AMPK信号通路、circadian rhythm信号通路、Hedgehog信号通路等可能参与了IA病理进程。结论:circRNA差异表达是IA发生的重要分子特征,hsa_circ_0003967等候选分子可能通过干预昼夜节律、Hedgehog信号通路等信号通路驱动颅内动脉瘤形成,为IA的机制研究与靶向治疗提供新线索。

    Abstract:

    Objective: The occurrence of intracranial aneurysms (IA) is closely related to genetic factors; However, research has shown that circular RNA (circRNA) is involved in vascular remodeling and inflammation regulation, and its role in the pathogenesis of IA is not yet clear. Therefore, this study aims to screen for circRNAs with differential expression in intracranial aneurysms and analyze their biological significance. Method: Sixteen clinical samples (10 IA tissues and 6 superficial temporal artery controls) were included, and DECs were screened using Illumina high-throughput sequencing technology; Combining the differences in visualization expression between volcano and heat maps, GO and KEGG joint enrichment analysis were applied to explore the functional associations of DECs; Further validate the expression levels of candidate circRNAs using qPCR. Result: A total of 28 850 DECs were identified (with 10 081 upregulated and 18 769 downregulated); KEGG analysis showed that IA related DECs were significantly enriched in the circadian rhythm, AMPK, and Hedgehog signaling pathways (P<0.001); QPCR validation showed that hsa_circ_0003967 and hsa_circ_0063305 were significantly upregulated in IA tissues (p<0.01); However, hsa_circ_0003091 and hsa_circ_0001742 were significantly down regulated (p<0.01), suggesting that these related signaling pathways such as cell adhesion, AMPK signaling pathway, circadian rhythm signaling pathway, Hedgehog signaling pathway, etc. may be involved in the pathological process of IA. Conclusion: Differential expression of circRNA is an important molecular feature in the occurrence of IA, and candidate molecules such as hsa_circ_0003967 may drive the formation of intracranial aneurysms by intervening in circadian rhythms, Hedgehog signaling pathways, and other signaling pathways, providing new clues for the mechanism research and targeted therapy of IA.

    参考文献
    相似文献
    引证文献
引用本文
分享
文章指标
  • 点击次数:
  • 下载次数:
历史
  • 收稿日期:2025-06-24
  • 最后修改日期:2025-11-16
  • 录用日期:2025-11-20
  • 在线发布日期:
关闭
关闭
关于作者收到不明邮件或短信的再次申明

关闭